SRX015141
GSM487426: K562 Fos ChIPSeq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
FOS

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562
biomaterial_provider
cellBiology
growth properties
Suspension Morphology
lymphoblast antibody
Fos

Sequenced DNA Library

library_name
K562_Fos_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
18366063
Reads aligned (%)
82.7
Duplicates removed (%)
9.4
Number of peaks
15377 (qval < 1E-05)

hg19

Number of total reads
18366063
Reads aligned (%)
82.2
Duplicates removed (%)
10.1
Number of peaks
15425 (qval < 1E-05)

Base call quality data from DBCLS SRA